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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs921866 chr17:18224482 C/T LOC162632 chr17:16614993-16707819:+ 0.36 5.88 7.73E-9 Box Plot
THCA rs921986 chr17:18227081 C/T LOC162632 chr17:16614993-16707819:+ 0.38 6.22 1.08E-9 Box Plot
THCA rs923996 chr3:23251372 G/A PRDM5 chr4:121606074-121844025:- -0.23 -6.05 2.95E-9 Box Plot
THCA rs925488 chr9:100546391 C/T ABCC11 chr16:48200821-48281479:- 0.3 6.11 2.02E-9 Box Plot
THCA rs925488 chr9:100546391 C/T BMPR1A chr10:88516358-88692595:+ -0.25 -6.49 2.21E-10 Box Plot
THCA rs925488 chr9:100546391 C/T C10orf47 chr10:11865397-11914274:+ -0.22 -5.9 6.99E-9 Box Plot
THCA rs925488 chr9:100546391 C/T CLDN2 chrX:106143394-106174091:+ 0.27 6.29 7.02E-10 Box Plot
THCA rs925488 chr9:100546391 C/T EFNB2 chr13:107142079-107187462:- -0.26 -6.15 1.64E-9 Box Plot
THCA rs925488 chr9:100546391 C/T EML5 chr14:89078775-89259096:- 0.3 6.97 1.05E-11 Box Plot
THCA rs925488 chr9:100546391 C/T EPDR1 chr7:37723446-37991543:+ 0.33 7.3 1.18E-12 Box Plot
THCA rs925488 chr9:100546391 C/T GGT5 chr22:24615622-24641110:- 0.26 5.94 5.35E-9 Box Plot
THCA rs925488 chr9:100546391 C/T LRRC42 chr1:54411750-54433841:+ -0.23 -5.93 5.85E-9 Box Plot
THCA rs925488 chr9:100546391 C/T NKX6-1 chr4:85413140-85419603:- 0.5 8.7 5.46E-17 Box Plot
THCA rs925488 chr9:100546391 C/T PLCE1 chr10:95790569-96092580:+ 0.27 6.17 1.49E-9 Box Plot
THCA rs925489 chr9:100546600 C/T BMPR1A chr10:88516358-88692595:+ -0.24 -6.28 7.82E-10 Box Plot